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update phonon compatibility#121

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kevinwenminion merged 26 commits into
devel-1.3.0from
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Jul 7, 2026
Merged

update phonon compatibility#121
kevinwenminion merged 26 commits into
devel-1.3.0from
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njzjz-bot and others added 26 commits January 24, 2026 05:18
Replace token-based authentication with OIDC (OpenID Connect) for codecov-action.
This is more secure and eliminates the need to manage upload tokens.

Changes:
- Add use_oidc: true to codecov-action configuration
- Add id-token: write permission at workflow level
- Remove token parameter from codecov-action (ignored when using OIDC)

This improves security and follows codecov-action best practices.

Generated by the task: njzjz-bot/njzjz-bot#25.
Bumps [actions/setup-python](https://github.com/actions/setup-python) from 5 to 6.
- [Release notes](https://github.com/actions/setup-python/releases)
- [Commits](actions/setup-python@v5...v6)

---
updated-dependencies:
- dependency-name: actions/setup-python
  dependency-version: '6'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action) from 5 to 7.
- [Release notes](https://github.com/codecov/codecov-action/releases)
- [Changelog](https://github.com/codecov/codecov-action/blob/main/CHANGELOG.md)
- [Commits](codecov/codecov-action@v5...v7)

---
updated-dependencies:
- dependency-name: codecov/codecov-action
  dependency-version: '7'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Bumps [actions/upload-artifact](https://github.com/actions/upload-artifact) from 4 to 7.
- [Release notes](https://github.com/actions/upload-artifact/releases)
- [Commits](actions/upload-artifact@v4...v7)

---
updated-dependencies:
- dependency-name: actions/upload-artifact
  dependency-version: '7'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Bumps [actions/checkout](https://github.com/actions/checkout) from 4 to 6.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](actions/checkout@v4...v6)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-version: '6'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Bumps [actions/download-artifact](https://github.com/actions/download-artifact) from 4 to 8.
- [Release notes](https://github.com/actions/download-artifact/releases)
- [Commits](actions/download-artifact@v4...v8)

---
updated-dependencies:
- dependency-name: actions/download-artifact
  dependency-version: '8'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
…ctions/download-artifact-8

Bump actions/download-artifact from 4 to 8
…ctions/checkout-6

Bump actions/checkout from 4 to 6
…ctions/upload-artifact-7

Bump actions/upload-artifact from 4 to 7
…odecov/codecov-action-7

Bump codecov/codecov-action from 5 to 7
…ctions/setup-python-6

Bump actions/setup-python from 5 to 6
ci: use OIDC for codecov-action
Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 3 to 4.
- [Release notes](https://github.com/docker/setup-buildx-action/releases)
- [Commits](docker/setup-buildx-action@v3...v4)

---
updated-dependencies:
- dependency-name: docker/setup-buildx-action
  dependency-version: '4'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 6 to 7.
- [Release notes](https://github.com/docker/build-push-action/releases)
- [Commits](docker/build-push-action@v6...v7)

---
updated-dependencies:
- dependency-name: docker/build-push-action
  dependency-version: '7'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Bumps [docker/login-action](https://github.com/docker/login-action) from 3 to 4.
- [Release notes](https://github.com/docker/login-action/releases)
- [Commits](docker/login-action@v3...v4)

---
updated-dependencies:
- dependency-name: docker/login-action
  dependency-version: '4'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Bumps [actions/checkout](https://github.com/actions/checkout) from 4 to 7.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](actions/checkout@v4...v7)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-version: '7'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
…ocker/setup-buildx-action-4

Bump docker/setup-buildx-action from 3 to 4
…ocker/build-push-action-7

Bump docker/build-push-action from 6 to 7
…ocker/login-action-4

Bump docker/login-action from 3 to 4
…ctions/checkout-7

Bump actions/checkout from 4 to 7
phonopy 4.1.0 ignores positional conf file arguments when in 'load mode'
(triggered by phonopy_disp.yaml). This caused band.yaml/mesh.yaml to not
be generated during the Post step for ABACUS phonon and gruneisen properties.

Fix: pass band.conf explicitly via --config flag, which phonopy 4.1.0
correctly reads as a configuration file even in load mode.

Tested with Cu FCC (ABACUS DFT, 2x2x2 supercell):
- phonon: band.yaml + band.dat + mesh.yaml generated successfully
- gruneisen: FORCE_CONSTANTS + mesh.yaml (3 volumes) generated successfully
Align unit tests with the phonopy 4.1.0 load-mode fix that passes
band.conf via --config instead of a positional argument.

Co-authored-by: Cursor <cursoragent@cursor.com>
fix(abacus): use --config flag for phonopy 4.1.0 load mode compatibility
@codecov

codecov Bot commented Jul 7, 2026

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 71.94%. Comparing base (560cf51) to head (bca347c).

Additional details and impacted files
@@             Coverage Diff              @@
##           devel-1.3.0     #121   +/-   ##
============================================
  Coverage        71.94%   71.94%           
============================================
  Files              103      103           
  Lines            21279    21279           
============================================
  Hits             15310    15310           
  Misses            5969     5969           

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@kevinwenminion kevinwenminion merged commit 65d7d2d into devel-1.3.0 Jul 7, 2026
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3 participants